PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g222530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 217aa    MW: 24204 Da    PI: 6.6275
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g222530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.7e-18105155255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t+e+A  a+++a+ k++g
  Pd.00g222530.m01 105 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETPEDAGLAYDRAAFKIRG 155
                       7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MYGETTLELE SNLALLESIR HHLLDDLEPQ ATSFSGNNVP TFPFFLTENW WESSLEAECA  60
DNTMQDMLEA LHDVNYVGCV VSNDEVQLKK QVAEGAVHAP REERHYRGVR RRPWGKFAAE  120
IRDPAKNGAR VWLGTYETPE DAGLAYDRAA FKIRGCKAKL NFPHLIGSSN VEPVRVTPKR  180
RRSPDQCSSS SSSAYTSDNG SSKPKRRAAG VDNHLAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179205KRRRSPDQCSSSSSSAYTSDNGSSKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-38ERF family protein