PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g222570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 218aa    MW: 23610.2 Da    PI: 8.078
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g222570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58e-19110159355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrdp +ng  +r +lg++ tae+Aa a+++a+ k++g
  Pd.00g222570.m01 110 YRGVRQRP-WGKYAAEIRDPAKNG--ARMWLGTYETAEDAALAYDRAAFKIRG 159
                       9*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MLGDKKSSLE SDFALLETIH QHLLDDNYFH GTLMANLSPN IPPAVEDLGK LSIVVPGESS  60
ESSSWSPPNQ NGVAEPAPAA WADTTEVKDN VQPKLAARET HAPPRGRQNY RGVRQRPWGK  120
YAAEIRDPAK NGARMWLGTY ETAEDAALAY DRAAFKIRGS KALLNFPHLI GSADDACDRG  180
RVTSTRRYRE CCDSLASSSD GGSPKRRRSS GVGSVGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-30ERF family protein