PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g222730.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 377aa MW: 43277 Da PI: 9.9775

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g222730.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.5	2.1e-17	107	187	6	89
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ + +g l lp kfa++h ++k++ + ++l+ ++gr+W v+++y+ + +++GW F+++n+Lk+gD++vF l++ +e Pd.00g222730.m01 107 IQPVYIHRGYLHLPSKFARRH-LVKQRARNIILKILDGRTWLVEFKYETSI--ARFQRGWLAFARDNNLKVGDVCVFVLIDCNE 187 5566677899*********.45567789***********555554..669********************986333 PP
2	B3	50.2	4.6e-16	297	376	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l +p +fa+++ +k +++t+tl+ + rsW v+li k ++ l +GW+eFv +n L gD+++F+l++r++ l+v++fr Pd.00g222730.m01 297 LHVPVTFARSFVKK--RKQTVTLQV-RERSWPVNLIGHTKESGAKLCGGWREFVTENCLMKGDVCIFELIERNDIVLKVHIFR 376 789***999755..444677655.78***9877777788999******************999999**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MKFLMRHGEN LSSPVHLKLP SGVEMEIELR RSNDGWVWFD KGWPEFSKLC SLDYGENDMP 60 TKKDLGGSSS SRIFLGRMHP LTKSEKALAL QRANAFESEY PYFLVAIQPV YIHRGYLHLP 120 SKFARRHLVK QRARNIILKI LDGRTWLVEF KYETSIARFQ RGWLAFARDN NLKVGDVCVF 180 VLIDCNERLF EVFFYRTNNA EDCPLSPGHG GVAIDRVEKR RNPMIKVETD CTTNYENGVS 240 CSLDPSLEIG KYKRLKTSGQ VTQRPLNSSS RSLEAANRFT PKNPSFRATL GSTPLILHVP 300 VTFARSFVKK RKQTVTLQVR ERSWPVNLIG HTKESGAKLC GGWREFVTEN CLMKGDVCIF 360 ELIERNDIVL KVHIFRC

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MKFLMRHGEN LSSPVHLKLP SGVEMEIELR RSNDGWVWFD KGWPEFSKLC SLDYGENDMP  60
TKKDLGGSSS SRIFLGRMHP LTKSEKALAL QRANAFESEY PYFLVAIQPV YIHRGYLHLP  120
SKFARRHLVK QRARNIILKI LDGRTWLVEF KYETSIARFQ RGWLAFARDN NLKVGDVCVF  180
VLIDCNERLF EVFFYRTNNA EDCPLSPGHG GVAIDRVEKR RNPMIKVETD CTTNYENGVS  240
CSLDPSLEIG KYKRLKTSGQ VTQRPLNSSS RSLEAANRFT PKNPSFRATL GSTPLILHVP  300
VTFARSFVKK RKQTVTLQVR ERSWPVNLIG HTKESGAKLC GGWREFVTEN CLMKGDVCIF  360
ELIERNDIVL KVHIFRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-20	B3 family protein