PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g223020.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 226aa    MW: 25273 Da    PI: 8.2666
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g223020.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.9e-1166116146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 
                       +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
  Pd.00g223020.m02  66 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 116
                       79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MNLQSALEFE FHSFSVIFSD PDLPICIANS FHGFDVNLLS ADRVQNLTGQ ISFWKNFGLW  60
LMGAPKQKWT AEEEAALKAG VLKHGAGKWR TILTDPEFNS ILHLRSNVDL KDKWRNINVT  120
AIWGSRQKAK LALKRNLPNP KHDNNPLAVS TVIQSHEEIV DAKPLAISGG KLQTTESKQP  180
IARLDHLILK AITNLKELGG SDRASIAMYI ETIESTLGEF RVCEVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.11e-55MYB_related family protein