PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g224670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 256aa    MW: 29403.6 Da    PI: 8.7925
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g224670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.11.5e-1311683596
                      EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                      + tl+d+sg  W+v l  + +++r+++ +GW+ Fvk++ L+   ++vF +dg+s+f   v++
  Pd.00g224670.m01 11 KCTLRDPSGDCWTVGL--EVRGDRFFFHEGWQPFVKDHSLEIANVLVFDYDGKSNF--DVTL 68
                      579*************..*********************************99888..5555 PP
2B358.51.2e-18149243699
                       ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       ++++  ++ r+ +pk+ a + g++   +k +++ed++g sW+vkl+    + ++gr ++tkGW+e ++an++  gD++vF+l++ + + ++++
  Pd.00g224670.m01 149 IRAMRKNRYRMNFPKELAVAKGLIR--KKSVRVEDPNGISWDVKLRLddkEHNGGRLLMTKGWSECCQANNISLGDTMVFELVNVKHGGMKMH 239
                       5566778899************995..557***************99876677777***************************999999**** PP

                       EE-S CS
                B3  96 vfrk 99 
                       +fr 
  Pd.00g224670.m01 240 IFRG 243
                       *996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDHVNGRLPP KCTLRDPSGD CWTVGLEVRG DRFFFHEGWQ PFVKDHSLEI ANVLVFDYDG  60
KSNFDVTLYD PIGSEMELEP AKKRRGNRAR VEEEIIELDT EEDSEEDARM SNIRKRKSFK  120
SGKRIARTDS GKETSNAPIV FISKHLCFIR AMRKNRYRMN FPKELAVAKG LIRKKSVRVE  180
DPNGISWDVK LRLDDKEHNG GRLLMTKGWS ECCQANNISL GDTMVFELVN VKHGGMKMHI  240
FRGNSYVVLD ASCVKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.15e-12B3 family protein