PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g224710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 422aa MW: 48589.4 Da PI: 6.1885

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g224710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	129.7	2.2e-40	32	159	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lp G+rF Ptd elv+ yL+ kv +k+++ + + ++di ++P+dL + + +e+ewyfF++r++ky++g+r+ r++ +g+Wkatg+ +++ Pd.00g224710.m01 32 LPCGYRFTPTDAELVSSYLEGKVLNKEIPK-NRFLDLDISLYHPRDLTgRFTLIRESEWYFFTSRKRKYPRGQRPDRSAVDGFWKATGRAQDI 123 699***********************99.67999*******9444445889****************99********** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++g+++g k+tL fy+g+++++++t+W mhey+l Pd.00g224710.m01 124 EDSNGKVIGSKRTLDFYQGNHQDSKRTEWKMHEYTL 159 ********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEENNRFINN PIPDQVDLFI NDPTNDAYFN SLPCGYRFTP TDAELVSSYL EGKVLNKEIP 60 KNRFLDLDIS LYHPRDLTGR FTLIRESEWY FFTSRKRKYP RGQRPDRSAV DGFWKATGRA 120 QDIEDSNGKV IGSKRTLDFY QGNHQDSKRT EWKMHEYTLD TETAPPNEIR NTRVTQLDNC 180 VLCKIYKNTK DGNNDSSTTQ SDQRAEPSTN VVASQAFPDQ QIQPVHQHDQ YLVGQSSGAS 240 SSSTANKRPR GMATPTIFMN TYVGNPTYYS HQQYPFQNQT SGNPPGPVYN NYQNLTQYNQ 300 NDQNLTQYGQ NDQNLTQDDQ NDQNLTQYDM QSANIESHVQ PRESFSSQPG FLPPMETSTY 360 ADQMPLVDSS SMQLPVHVRL YEQLLAARIK DGGLDKRLER WYHHQQQLFR QNPSSTPNCK 420 LV

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEENNRFINN PIPDQVDLFI NDPTNDAYFN SLPCGYRFTP TDAELVSSYL EGKVLNKEIP  60
KNRFLDLDIS LYHPRDLTGR FTLIRESEWY FFTSRKRKYP RGQRPDRSAV DGFWKATGRA  120
QDIEDSNGKV IGSKRTLDFY QGNHQDSKRT EWKMHEYTLD TETAPPNEIR NTRVTQLDNC  180
VLCKIYKNTK DGNNDSSTTQ SDQRAEPSTN VVASQAFPDQ QIQPVHQHDQ YLVGQSSGAS  240
SSSTANKRPR GMATPTIFMN TYVGNPTYYS HQQYPFQNQT SGNPPGPVYN NYQNLTQYNQ  300
NDQNLTQYGQ NDQNLTQDDQ NDQNLTQYDM QSANIESHVQ PRESFSSQPG FLPPMETSTY  360
ADQMPLVDSS SMQLPVHVRL YEQLLAARIK DGGLDKRLER WYHHQQQLFR QNPSSTPNCK  420
LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-36	NAC family protein