PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g224970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 223aa MW: 25239.5 Da PI: 8.6618

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g224970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	62	81	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Pd.00g224970.m01 62 FSCPVCYKTFNRYNNMQMHM 81 89*****************9 PP
2	zf-C2H2	15.3	5.6e-05	146	168	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Pd.00g224970.m01 146 FMCRKCGKAFAVRGDWRTHEKNC 168 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MASVLSAAAV TSSSSEISTH HNEKLDHGGD NDSAGYPMSC RLNKGQYWIP TPSQILIGPT 60 QFSCPVCYKT FNRYNNMQMH MWGHGSQYRK GPESLRGTQP TGMLRLPCYC CTPGCRNNID 120 HPRAKPLKDF RTLQTHYKRK HGIKPFMCRK CGKAFAVRGD WRTHEKNCGK LWYCICGSDF 180 KHKRSLKDHI KAFGNGHAAY GIDGFEEEDD PASEVEQDNE SMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-136	C2H2 family protein