PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g225610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 382aa MW: 41538.1 Da PI: 9.8853

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g225610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.9	2.9e-43	78	155	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls+ak y++rhkvC hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ Pd.00g225610.m01 78 RCQVEGCQVDLSDAKAYYSRHKVCGLHSKTPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 155 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MEMSSSSMTE SGSSSSSSPP NSSTESLNGL KFGQKIYFED ASLGASYKSG SAGSSSSGAT 60 PPKKQRAGHL AHPGQPPRCQ VEGCQVDLSD AKAYYSRHKV CGLHSKTPKV IVAGLEQRFC 120 QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKPQPGSVSA RFGRLSSSLF ENSNKVGSFL 180 MDFTAYPRPA DRDAWAITRT SERVPVNQNA NAMGKFLQHP WQSNSVTTSS RYLQGSAGGT 240 SYPDPGIPPR ECVTGVADSS CALSLLSNQP WGSRNRPSGV GMNAYLNTWM NTQGVTVTQP 300 MAHAGTSNHF PTTSLGFKGN EAGSSSHEML PDLGLGQISQ PLSRQYSGVL ELSQQNRRQQ 360 HMELGHTRGY ESSTNQQMHW SL

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MEMSSSSMTE SGSSSSSSPP NSSTESLNGL KFGQKIYFED ASLGASYKSG SAGSSSSGAT  60
PPKKQRAGHL AHPGQPPRCQ VEGCQVDLSD AKAYYSRHKV CGLHSKTPKV IVAGLEQRFC  120
QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKPQPGSVSA RFGRLSSSLF ENSNKVGSFL  180
MDFTAYPRPA DRDAWAITRT SERVPVNQNA NAMGKFLQHP WQSNSVTTSS RYLQGSAGGT  240
SYPDPGIPPR ECVTGVADSS CALSLLSNQP WGSRNRPSGV GMNAYLNTWM NTQGVTVTQP  300
MAHAGTSNHF PTTSLGFKGN EAGSSSHEML PDLGLGQISQ PLSRQYSGVL ELSQQNRRQQ  360
HMELGHTRGY ESSTNQQMHW SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-69	SBP family protein