PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g226950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 230aa    MW: 26761.6 Da    PI: 4.8785
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g226950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.45.9e-192273254
               NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54
                       pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLp+ ++++
  Pd.00g226950.m01 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPNIHRSS 73
                      59***************************.89***************532222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK  60
HDPWDLPNIH RSSNTKNINS TDPQQEAEIW TLCRIFKRNV SYKKYTADWR GLSGAKRHPM  120
DTVSSKKCTS DQDDLDQSNN YISFGASDNI ICYEEKKPVV NHTNMNNFNG SNQQLHAVGQ  180
LSSNMPATYP YMETFANFSY QDLENELLNE NWDELRSAAV HLAFDPTFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-23NAC family protein