PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g227150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 460aa MW: 52017.3 Da PI: 6.5235

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g227150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	32.6	2.6e-10	204	272	2	73
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.d 73 +Y++Y+++ GF v k++s++ ++g+ + t C +egk+++++++ ++r++ + +Cka+l+ +++ + Pd.00g227150.m01 204 YYKQYGRQSGFPVIKRSSTNG-DDGNLKYVTISCAREGKSKSKSSN---FLKPRPSIKNDCKAQLRAAQRSaK 272 8**********99987776.9999***********99888...999***********99888643 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MEWRTMVHVA DPNSWNKVPL YLTLKDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST 60 LHLVLRLRGG TMIKVKTLTG KEIEIDIEPN DTIDRIKERV EEKEGIPPVQ QRSTIMGTRI 120 SASESEDTSH INNNSPIDQG MEESSARLEN NQHDDAVEMN FNGIEKENNG DETENNDTVM 180 SVEEKVQDPQ VGMIFDSIDE VITYYKQYGR QSGFPVIKRS STNGDDGNLK YVTISCAREG 240 KSKSKSSNFL KPRPSIKNDC KAQLRAAQRS AKMQKNFDDI KELANDSDDK CMVVMNWMHN 300 LKEEICKHDG TCKRTEPTPQ SPIGKSFEPD VNGLPNASQR ILTPLPVRSK GRPPFKRRQS 360 KTEQVIKKRQ RTGRKTKYRQ DNTDGGTEIP AQSDVFCHTA TPPILESDNL VGTQESNNVV 420 MLLGLTHGGH PDQLYKPPLT GNITYPTVHE NYFQGDQYQN

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MEWRTMVHVA DPNSWNKVPL YLTLKDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST  60
LHLVLRLRGG TMIKVKTLTG KEIEIDIEPN DTIDRIKERV EEKEGIPPVQ QRSTIMGTRI  120
SASESEDTSH INNNSPIDQG MEESSARLEN NQHDDAVEMN FNGIEKENNG DETENNDTVM  180
SVEEKVQDPQ VGMIFDSIDE VITYYKQYGR QSGFPVIKRS STNGDDGNLK YVTISCAREG  240
KSKSKSSNFL KPRPSIKNDC KAQLRAAQRS AKMQKNFDDI KELANDSDDK CMVVMNWMHN  300
LKEEICKHDG TCKRTEPTPQ SPIGKSFEPD VNGLPNASQR ILTPLPVRSK GRPPFKRRQS  360
KTEQVIKKRQ RTGRKTKYRQ DNTDGGTEIP AQSDVFCHTA TPPILESDNL VGTQESNNVV  420
MLLGLTHGGH PDQLYKPPLT GNITYPTVHE NYFQGDQYQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	6e-07	FAR1 family protein