PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g227410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 256aa    MW: 29105 Da    PI: 4.5939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g227410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21e-06193236755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        + r RR++i ++ +eL +l+P        K++ ae+L+ A +++k+L+
  Pd.00g227410.m01 193 VAARERRRKITEKTQELGKLVPGG-----SKMNTAEMLTAAYNFVKYLR 236
                       56799*****************95.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MALSSFSSRE TVPPQSFGSE MTNCFQPNIE AELLTAEELL KYYQLDYNCS ILPNNLFLDD  60
HPCPDPYNLL NLENYHPDTT SDDHLLLPHL TTSDMFPQLD FYPYPYPKRQ KCFQDFVYPE  120
FTPANFYDAF APDSCPLPEL LPAPGVFATP LLTFNQHPEE TVTDSNKLKV NDYEIGFTAK  180
KKVEEKCVSA QSVAARERRR KITEKTQELG KLVPGGSKMN TAEMLTAAYN FVKYLRAQVG  240
ILEFMGSFQV FCSVSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180201KKKVEEKCVSAQSVAARERRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.15e-19bHLH family protein