PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g227920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 223aa    MW: 26696.4 Da    PI: 9.6905
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g227920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.95.4e-182622386
          trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      ++k++k lWe ++ km+e+g +rs++qCk+kw+nl +ryk ++++e +     ++++p++++l+
  Pd.00g227920.m01  2 ETKRNKLLWEVIATKMKEKGHHRSAEQCKCKWKNLVTRYKGCETMEPEA---MRQQFPFYNELQ 62
                      56889******************************************95...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
METKRNKLLW EVIATKMKEK GHHRSAEQCK CKWKNLVTRY KGCETMEPEA MRQQFPFYNE  60
LQAIFAARMQ RMLWAEESGA ASGSKKKALS SDEEEDNEDS EAENKASTVR KKKKKVKMSN  120
IGIGSTSGSG SGNNVREILE EFMKQQMQME MQWREEFQAR ENERRLKEME WRQTMEALEN  180
ERIMMERRWR EREEQRRMRE EARAEKRDAL ITALLNKLRR EDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.18e-40Trihelix family protein