PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g228660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 128aa    MW: 14350.4 Da    PI: 8.8857
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g228660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002489102114
                       EEETTTTEEESSHH CS
           zf-C2H2   1 ykCpdCgksFsrks 14 
                       ++C+dCgk+F+  s
  Pd.00g228660.m01  89 HVCQDCGKVFKFAS 102
                       79********9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MREVSDFNGP VSGGRPPVKL HQVNLNHVLL GIDILKKYLF DNVEHWIPHK ELQNARGFDL  60
NGPVPGGRPP GKLHQASLNN AIVGGQKQHV CQDCGKVFKF ASKPRKHDNS HVKLDSLEAF  120
CSEYEIFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.27e-11C2H2 family protein