PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g230170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 332aa    MW: 36957.9 Da    PI: 4.9531
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g230170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like61.12.3e-1958111155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r +W + LH++F++a+++  G +kA Pk+il +m+ + Lt+++v+SH QkYR+
  Pd.00g230170.m01  58 KKRFKWKNSLHDKFLRAIAHS-GFDKAKPKKILAFMNEPNLTISQVASHWQKYRI 111
                       68******************9.********************************6 PP
2Myb_DNA-binding32.22.5e-1062110348
                       SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       +W   +++++++a++  G +   +k+I + m+  ++t  q+ s+wqky+
  Pd.00g230170.m01  62 KWKNSLHDKFLRAIAHSGFDkaKPKKILAFMNePNLTISQVASHWQKYR 110
                       799*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MASKSVSIVA LLFSVLILCL LGTYADLIQG WEEGGFGNGN WDGQGYGDDE ERTAAPRKKR  60
FKWKNSLHDK FLRAIAHSGF DKAKPKKILA FMNEPNLTIS QVASHWQKYR IFLKEKDAAA  120
GDEDELERLR RSSFARERLS RSVGSTFQVQ PSAGIGSTLP LTAAASNSHG SIPPLIRSGQ  180
SSLLNNNPAN FPRQQPTLGN RHGDQLVFQE NRPAAFGMQQ PSNNFEYGGN VENSNGYLHG  240
IFMMLLPDEQ DNYQPPSQQQ DGGHDQLPYQ VEVPDPATSQ VPNLSADQVP NPGPYHVEDN  300
ALNETNHTWF SYLSEDIWDA DIWEDGIRDV DT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15786RKKRFKWKNSLHDKFLRAIAHSGFDKAKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07210.18e-19ARR-B family protein