PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g230350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 248aa    MW: 27698.7 Da    PI: 4.9149
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g230350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP45.41.3e-14831242971
           E2F_TDP  29 evakeLvse.dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       e a++L se + kn+ RR+YD+lNVLeal++i++  k+ei+w+g
  Pd.00g230350.m01  83 ETATSL-SEfNDKNIPRRVYDALNVLEALDIITR-VKKEIKWNG 124
                       344555.337999*********************.9******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDDNYSGDSF GGFFQKHSSA ESSVSASLNN AAAFGSARRS ITFDHDDTGT ADVETECLSA  60
SNNSDGVQLA DYIMSELAGN DSETATSLSE FNDKNIPRRV YDALNVLEAL DIITRVKKEI  120
KWNGIPDRKM DLEGMKAECV KMMNRIGRKT AYLKDLEEQT SRDAAVEIEI SEDKHMVHFD  180
FNSAPFFLHD DTYILKLLRR HQPPERTNVS QNSSVYPPSP CPSIVSGGAR PFYWNSGTET  240
RNSKMNRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.13e-37E2F/DP family protein