PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g233090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 209aa    MW: 23651.9 Da    PI: 8.801
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g233090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.31.9e-2644133190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       k+Y +YA++vGF vr+ + ++s  +g++  r++ C+k+g++ ++k k   e+++r++ r gC+a++ vk+ek+gkw+vt+++++HnH+l+
  Pd.00g233090.m01  44 KYYTDYARQVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQKGKFGPEKKPRPSAREGCNATILVKMEKSGKWVVTRFVKDHNHPLV 133
                       69*********************************************9****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MTVDLEREAG AVDESVEIAI VASEGPIPEP YVGMEFDSED AARKYYTDYA RQVGFVVRVM  60
QRRRSGIDGR TLARRLGCNK QGFSPNQKGK FGPEKKPRPS AREGCNATIL VKMEKSGKWV  120
VTRFVKDHNH PLVVTASGFS TAGDKDRKIE ELMMELERQD QLCAGYREKL LSFMNNVEAE  180
TEELSGKIQV IVDNVRKVES EVQKHSRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.11e-74FAR1 family protein