PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g233100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 247aa    MW: 28475.5 Da    PI: 10.2932
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g233100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR196.62.8e-3078165290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw vt++++eHnH+l+
  Pd.00g233100.m01  78 FYDAYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKEHNHPLV 165
                       9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGNFRHTKRR STSLTQKLSK LLGQDLSLKT MDEQSSMSKD EDVIESSNGK DAVTSEGNSD  60
MEPYVGMEFE SEEAAKVFYD AYATHLGFIM RVDAFRRSMR DGKVVWRRLV CNKEGFRKTR  120
PKRSENRKPR AITREGCKAM IVVKKEKSGK WIVTRFVKEH NHPLVVTPAN GRRTVLLSQT  180
PDEKDVKIRE LMAELQRERK RSAAYQEQLD MVLREMEEHS NHLSRNIDGI VQSVKEIESK  240
RVAPSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-97FAR1 family protein