PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g234280.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 298aa MW: 33517.1 Da PI: 5.122

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g234280.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed+ l+++++ +G g W+ +++ g++R++k+c++rw++yl Pd.00g234280.m01 14 KGAWSAWEDKALANYINTHGEGKWRDLPQRAGLNRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.7	1.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g234280.m01 67 RGNISPEEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGRKPCCDKE GLNKGAWSAW EDKALANYIN THGEGKWRDL PQRAGLNRCG KSCRLRWLNY 60 LRPDIKRGNI SPEEEELIVR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLSKRSEQGS 120 DKAHQDQRSA STSSKDDTKK SNNPASKSPV QVVRTKAFKC RKVAIPSHLD GHDQMLERSN 180 VAPGSDSESL CSSAVQEHDS SFGFLRDFDI NDMLIPDVLS SDFQQAQINN CDQDMLECGI 240 TKIEDLLMGE ARLGEWRADD DDQGDPIQPN DDDHGDVNGF NALSSFLNSV DDDQWIIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-59	MYB family protein