PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g240370.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 143aa    MW: 16343.7 Da    PI: 12.2247
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g240370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26036.31.6e-111431860
            DUF260 18 lapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamss 60
                      +apyfpa++ ++f+n+hk+FG+ n++k+++ + +++r++a+++
  Pd.00g240370.m01  1 MAPYFPASRYSEFQNAHKIFGVINIQKIMAMAAPDQRQAAAEA 43
                      59*************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MAPYFPASRY SEFQNAHKIF GVINIQKIMA MAAPDQRQAA AEAFSRRERK NLLSWAAAAA  60
FLSSHRLVDS LAFRFRPKHF ALSPRHLRRR SQFVPTSRLF TKLSSVSPSD DSSLGTTSLR  120
YPNRFRSQGL LGKDQNLQSR FPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.12e-06LBD family protein