PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g241470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 314aa    MW: 35178.9 Da    PI: 9.9348
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g241470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.15e-34541941128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 
                       lp+G++F+Ptd+e++ ++L++kv +++      ++  e   +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++    
  Pd.00g241470.m01  54 LPAGVKFDPTDQEIL-QHLEAKVLSDTrklhplID--EfipTLEGEnGICYTHPEKLP-GVNKDGQIRHFFHRPSKAYTTGTRKRRKVHteed 142
                       799***********9.99****9999956644322..22222333336**********.666777788******************7444465 PP

               NAM  80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                         + +W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  Pd.00g241470.m01 143 gsETRWHKTGKTRPVLV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 194
                       55778************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MYMSAGTRNI YAGQSNYPLQ SCPSLLVAKA SKTSPSGKSL TWHMAIGIHD LPGLPAGVKF  60
DPTDQEILQH LEAKVLSDTR KLHPLIDEFI PTLEGENGIC YTHPEKLPGV NKDGQIRHFF  120
HRPSKAYTTG TRKRRKVHTE EDGSETRWHK TGKTRPVLVG GAVKGFKKIL VLYTNYGRQR  180
KPEKTNWVMH QYHLGNNEEE KDGELVVSKV FYQTQPRQCG SSIKDVQMFD HHKGVNIRSG  240
HGHDPLPIAK KAGLVEYYNP GGGFINYDHH NLHNQGGHNR ESPPQLIPNL VVQGDGSSFI  300
RLTADASKGK LERK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-116NAC family protein