PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g242260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 196aa    MW: 22292.4 Da    PI: 8.7203
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g242260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind97.81e-30191182102
                       HHHHHHHHHC......TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXX CS
      HSF_DNA-bind   2 Flkklyeile......deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksF 86 
                       Fl+k+y++le       ++ k+++sw+++g+ f+v+ + ef++ +LpkyFkh+nf+SF+RQLn+Y  gFkk++ ++         weFkh++F
  Pd.00g242260.m01  19 FLSKTYDLLEegaaeeGDSGKKIVSWNAEGSGFIVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYkqGFKKTSPKQ---------WEFKHEKF 102
                       9*********66555444899********************************************66677777666.........******** PP

                       XXXXXXXXXXXXXXXX CS
      HSF_DNA-bind  87 kkgkkellekikrkks 102
                       +kg +++l +i rkk 
  Pd.00g242260.m01 103 QKGCRHMLVEITRKKC 118
                       *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MAATTSSGQS PRTRSPAPFL SKTYDLLEEG AAEEGDSGKK IVSWNAEGSG FIVWSPAEFS  60
ELLLPKYFKH NNFSSFIRQL NTYKQGFKKT SPKQWEFKHE KFQKGCRHML VEITRKKCEP  120
SAFPVYLKAS EESGSGNTAV AAAEENNCLL LMEENKNLRK QKLELQMQIS QFKALEMKLL  180
DCLAQNMEDH QNKVRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.11e-37HSF family protein