PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g243160.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 183aa    MW: 20883.3 Da    PI: 8.7944
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g243160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.13.5e-12443848
                      HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      Ed+ l++av+++G+++W+++ar +g + tl +c+srw ++l
  Pd.00g243160.m01  4 EDKDLIEAVERYGTHRWEAVARILG-TITLRECQSRWVNWL 43
                      99***********************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MFGEDKDLIE AVERYGTHRW EAVARILGTI TLRECQSRWV NWLDPQIRRD EWSQTEDTKL  60
RELSTAQWQT ISGMFNGSRT TMACQLRHSF LLENPQRISS QEGSSSFTKK LAHHSLRLRR  120
LPSFLLTSFC IRCLQVLGKG IESHRLAQIA VVILLLCGCF SKCLIASLTT VINLLLGVLN  180
FCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.11e-16MYB family protein