PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g243580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 250aa    MW: 28342.7 Da    PI: 6.8829
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g243580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.9e-131461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W+++Ed +l+ +++++G  +W+  ++  g+ R++k+c++rw +yl
  Pd.00g243580.m01 14 KGPWSPDEDHKLIAYIQRYGIWNWSQMPKPAGLARSGKSCRLRWVNYL 61
                      79******************99************************97 PP
2Myb_DNA-binding569e-1867112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++++eE+e ++++++ +G++ W++Ia+t++ gRt++++k++w+++l
  Pd.00g243580.m01  67 RGSFSKEEEEAILKLHETMGNR-WSAIAATLP-GRTDNEIKNYWHTHL 112
                       899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MVKSQQCEKA AVKKGPWSPD EDHKLIAYIQ RYGIWNWSQM PKPAGLARSG KSCRLRWVNY  60
LRPDIKRGSF SKEEEEAILK LHETMGNRWS AIAATLPGRT DNEIKNYWHT HLKKRFKATE  120
PVQEAQVFND KKKFSETEIF LLGEAPKASK LETTSTSSSS GPVHGDHNKD QIAEQNICAS  180
ETFGELQSLW AESHIVRYSE AIFTDSGFTL SNPPTQSWLQ EPIFPSGSSY NDASNDYWVN  240
LSMQAEIDGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-57MYB family protein