PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g245070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 1092aa MW: 119149 Da PI: 6.8108

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g245070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3e-30	358	416	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g245070.m01 358 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 416 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1092 aa Download sequence
MDKGWGLTLD SDSFGFFLNK PPAAVKLDHH QNNSKRSNFF GGERMFPGIE FPVKLGGRED 60 QLAAPQPSIH DNNNRVVVDE VDFFSDRKNK NNTTTTDDHH QDMKSNGTIN IKKENWTGLD 120 VNTGLHLVTA NTGSDQSMVD DGISSDVDNK RAKNHELAQL QVELQRMNSE NLRLKEMLGQ 180 VTNNYSALQM HVAAVMQQQQ QNHTAAADQS SQLNHEQNVE AKSDQEKKQG LVPRQFLDLG 240 PRATAETDDQ VSNSSSEART RSASPQNINE AASSKDHHLK KNDHPIGPLD PENSNNFRDG 300 KRVGREESPE SESQGWVPNK APKLNNSAAN KPIDQSTEAT MRKARVSVRA RSEAPMITDG 360 CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA 420 AMAMASTTTA AASMLLSGSM SSADGIMNPN NLLARAILPC SSSVATISAS APFPTVTLDL 480 TTTPLQFQRP QSQFQVPFPG QQPQLPQSAS FADTVSAATA AITADPTFTA ALAAAITSII 540 GGATFADLPG PYFEWEKMDA APVARLDAAA IRIKNLLFVF AGYGTVNFVF LHQLSLALFL 600 FFCCEPATIK PVNMGTIFKA VVLPLFLSSL LLSLVSSAPN DGLFRIGLKK VKLDPNNRVA 660 AQLESKNVEA LRASMRKYHL PANLEDSGDI DIVSLKNYMD AQYYGEIAIG TPPQTFTVIF 720 DTGSANLWVP SSKCRFSVAC YFHANYKSGK SSTYKKNGTS ASIQYGTGAI SGFYSNDNVQ 780 VGDIVVENQD FIEATSEPGL IFLAAKFDGL LGLGFQEISV GKAVPVWYNM IEQGLIKKPL 840 FSFWLNRNAQ EEEGGEIVFG GVDPNHFKGK HTYVPVTKKG YWQTVITMIN QAIGAEGVVS 900 QECKAVAQQY GQTIMNLLLA EARPDKVCSQ IGLCTFDGTR SVSMGIESVV DKSNGKSSGI 960 LHDASCSACE MAVVWMKNQL EQNQTQDRIL NYVNELCERM PSPMGQSAVD CGRLSSMPSV 1020 SFTIGGKVFK LTPNEYILKV GEGPQAQCIS GFTSIDIPPP RGPLWILGDI FMGRYHTVFD 1080 SGNMRVGFAE AV

Sequence ? help Back to Top

Protein Sequence Length: 1092 aa Download sequence

MDKGWGLTLD SDSFGFFLNK PPAAVKLDHH QNNSKRSNFF GGERMFPGIE FPVKLGGRED  60
QLAAPQPSIH DNNNRVVVDE VDFFSDRKNK NNTTTTDDHH QDMKSNGTIN IKKENWTGLD  120
VNTGLHLVTA NTGSDQSMVD DGISSDVDNK RAKNHELAQL QVELQRMNSE NLRLKEMLGQ  180
VTNNYSALQM HVAAVMQQQQ QNHTAAADQS SQLNHEQNVE AKSDQEKKQG LVPRQFLDLG  240
PRATAETDDQ VSNSSSEART RSASPQNINE AASSKDHHLK KNDHPIGPLD PENSNNFRDG  300
KRVGREESPE SESQGWVPNK APKLNNSAAN KPIDQSTEAT MRKARVSVRA RSEAPMITDG  360
CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA  420
AMAMASTTTA AASMLLSGSM SSADGIMNPN NLLARAILPC SSSVATISAS APFPTVTLDL  480
TTTPLQFQRP QSQFQVPFPG QQPQLPQSAS FADTVSAATA AITADPTFTA ALAAAITSII  540
GGATFADLPG PYFEWEKMDA APVARLDAAA IRIKNLLFVF AGYGTVNFVF LHQLSLALFL  600
FFCCEPATIK PVNMGTIFKA VVLPLFLSSL LLSLVSSAPN DGLFRIGLKK VKLDPNNRVA  660
AQLESKNVEA LRASMRKYHL PANLEDSGDI DIVSLKNYMD AQYYGEIAIG TPPQTFTVIF  720
DTGSANLWVP SSKCRFSVAC YFHANYKSGK SSTYKKNGTS ASIQYGTGAI SGFYSNDNVQ  780
VGDIVVENQD FIEATSEPGL IFLAAKFDGL LGLGFQEISV GKAVPVWYNM IEQGLIKKPL  840
FSFWLNRNAQ EEEGGEIVFG GVDPNHFKGK HTYVPVTKKG YWQTVITMIN QAIGAEGVVS  900
QECKAVAQQY GQTIMNLLLA EARPDKVCSQ IGLCTFDGTR SVSMGIESVV DKSNGKSSGI  960
LHDASCSACE MAVVWMKNQL EQNQTQDRIL NYVNELCERM PSPMGQSAVD CGRLSSMPSV  1020
SFTIGGKVFK LTPNEYILKV GEGPQAQCIS GFTSIDIPPP RGPLWILGDI FMGRYHTVFD  1080
SGNMRVGFAE AV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-103	WRKY family protein