PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g247300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 164aa MW: 19124.4 Da PI: 10.4114

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g247300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.6e-06	25	44	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Pd.00g247300.m01 25 FSCPVCYKTFNRYNNMQMHM 44 89*****************9 PP
2	zf-C2H2	15.9	3.6e-05	109	131	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Pd.00g247300.m01 109 FMCRKCGKAFAVRGDWRTHEKNC 131 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MSCRLNKGQY WIPTPSQILI GPTQFSCPVC YKTFNRYNNM QMHMWGHGSQ YRKGPESLRG 60 TQPTGMLRLP CYCCTPGCRN NIDHPRAKPL KDFRTLQTHY KRKHGIKPFM CRKCGKAFAV 120 RGDWRTHEKN CGKLWYCICG SDFKHKRILP KSIHQFTNLI IPSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-110	C2H2 family protein