PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g250220.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 853aa MW: 96599.1 Da PI: 10.2242

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g250220.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.2	3e-18	282	371	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v + +l lp kf+e+h +k ++s +++lede+g++++ + +k+ + l++GW++F+ +++L++gD +vF+l++ +f + Pd.00g250220.m01 282 FVKSMVRSHVYSCFWLGLPSKFCEDHLSK-TGS-EMVLEDEDGNEYDAVY--IGKRAG--LSGGWRGFALEHKLDDGDALVFELTEPARF--K 366 89**********************655.444.9***********..555544..9********************9764444..7 PP EEEE- CS B3 94 vkvfr 98 + +f+ Pd.00g250220.m01 367 IYIFK 371 77775 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MGKQPVRMKA VVYALSPFQQ KVMPGLWKDL PTKIHHKISE NWISATLLLG PLVGVYSYVQ 60 SYQEKEKLEH RTQIQIRFGF GLHFMVGAEG STSYRSPGLL GCAITEHLNS LWFSDTATFS 120 LDQSDLAFSL LGQSDSKRKM VAAVDSFTPN TYEEARNQRL EENKRKFQDL GISNISKTLT 180 HLTASPNKSQ QRVSRPKAKN TCFDLEPRRS SRQRNPIQSY RDDVDIGLPT LRKGSRKTSS 240 SWGSYLARPI EEVRAASYEE RSAAFKAAEK LQENLQTENP SFVKSMVRSH VYSCFWLGLP 300 SKFCEDHLSK TGSEMVLEDE DGNEYDAVYI GKRAGLSGGW RGFALEHKLD DGDALVFELT 360 EPARFKIYIF KAYPMPSLEC FKNNVDKEEI TSAEKTSKAA MKTDSESNQK RRSKRGIVLE 420 MDEPQTSPDS EPNQKRRSKK GTVPAMIDTK TSPDSESIQK RRSERGVVPV MEDSKTSRVL 480 EPNQRQRSKR GMVPEMEDTE TSPDSEPNQK RRSKRCTVPA MVDTKTSLDS ESIQKRRSQR 540 GVVPVMEDSK TSPVLEPNQR RRSKRGMAPE MEDTKTSPDS EPNQKRRSKR GTVPAIVDTK 600 TSLDSESIQK RRSQRGVVPV MEDSKTSPVL EPNQRRRSKR GMAPEMEDTK TSPDSEPNQK 660 RRSKRGTVPA MVDTKTSLDS ESIQKRRSQR GVVPVMEDSK TFPVLEPNQR RRSKRGMVPV 720 MDDTQTSPDS ESNQKQRSKR GIVPEMDDTK TSPKALPDSP KGQEIEQEVS PMKNEVAPKQ 780 IRKKAKANRV RSTENPEGCE VQEASTKSLE GCEVKQEAST TETDSRVVKD EKECVARKPR 840 KKVVKERLFR KRA

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MGKQPVRMKA VVYALSPFQQ KVMPGLWKDL PTKIHHKISE NWISATLLLG PLVGVYSYVQ  60
SYQEKEKLEH RTQIQIRFGF GLHFMVGAEG STSYRSPGLL GCAITEHLNS LWFSDTATFS  120
LDQSDLAFSL LGQSDSKRKM VAAVDSFTPN TYEEARNQRL EENKRKFQDL GISNISKTLT  180
HLTASPNKSQ QRVSRPKAKN TCFDLEPRRS SRQRNPIQSY RDDVDIGLPT LRKGSRKTSS  240
SWGSYLARPI EEVRAASYEE RSAAFKAAEK LQENLQTENP SFVKSMVRSH VYSCFWLGLP  300
SKFCEDHLSK TGSEMVLEDE DGNEYDAVYI GKRAGLSGGW RGFALEHKLD DGDALVFELT  360
EPARFKIYIF KAYPMPSLEC FKNNVDKEEI TSAEKTSKAA MKTDSESNQK RRSKRGIVLE  420
MDEPQTSPDS EPNQKRRSKK GTVPAMIDTK TSPDSESIQK RRSERGVVPV MEDSKTSRVL  480
EPNQRQRSKR GMVPEMEDTE TSPDSEPNQK RRSKRCTVPA MVDTKTSLDS ESIQKRRSQR  540
GVVPVMEDSK TSPVLEPNQR RRSKRGMAPE MEDTKTSPDS EPNQKRRSKR GTVPAIVDTK  600
TSLDSESIQK RRSQRGVVPV MEDSKTSPVL EPNQRRRSKR GMAPEMEDTK TSPDSEPNQK  660
RRSKRGTVPA MVDTKTSLDS ESIQKRRSQR GVVPVMEDSK TFPVLEPNQR RRSKRGMVPV  720
MDDTQTSPDS ESNQKQRSKR GIVPEMDDTK TSPKALPDSP KGQEIEQEVS PMKNEVAPKQ  780
IRKKAKANRV RSTENPEGCE VQEASTKSLE GCEVKQEAST TETDSRVVKD EKECVARKPR  840
KKVVKERLFR KRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	485	490	RQRSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	4e-71	B3 family protein