PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g250390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 993aa MW: 109116 Da PI: 7.3443

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g250390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.9	1.9e-18	426	526	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + Pd.00g250390.m01 426 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PG 516 99************************555556667***********99899999999.*******************887.77 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++lv++++++ Pd.00g250390.m01 517 GRLVMGFRKA 526 7788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MDGVITSQVV FKIWVLQIWT KKGFAGVEFG IMGSKICMNV LCGTTNTHEW KKGWPLRSGG 60 FAHLCFKCGA AYEKLVYCDK FHAGESGWRD CSLCRKPLHC GCIVSKSLYE FLDYGGVGCI 120 SCAKSSQPRV IQNDDVLNGF GGLKISNYSD RQSTAVQNGA FSNTVDEGKL LQLCKIMEAN 180 ESNLLPQPQR GDINVSLVQK KQEEVINHKG EVGLGFSSTT QPSIGSLTFS KSENGRTMIE 240 DMHKSSSQPS LSMTLGSPSA TPSFVQPFPG GLVDGREQSK TPSSFQQGHG REQGTTPSFQ 300 QGLVDGREQS KTSSSFQQGL VDGREHSKTP SSFQQGLVDG REQSKTPSSS FQQGQKSRPI 360 LPKPLKPGVT MSSETNKGGF PNVRVARPPA EGRGKNQLLP RYWPRITDQE LQKLSGDLNS 420 TIVPLFEKVL SASDAGRIGR LVLPKACAEA YFPPISQSEG LPIKIQDVKG NEWMFQFRFW 480 PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPGGRLV MGFRKASKSL DMQDPQTSIL 540 PNGSTPGETS CPSVVENPAT GSGHPGLFQT NTGSKDPHLH ALSEHLHLTD GDMSLHRNDY 600 HGHRTSEDLL QQPVSNSDKK RARNIGPKSK RLLMHSEDVL ELRLTWEEAQ DLLRPPPSVK 660 PSIVTIEDHE FEEYDEPPVF GKRSLFIASS SERQEQWAQC DDCSKWRRLP ADVLLPPKWT 720 CSENSWDTSR RLCSAPEEMS QKDFDSLLRA SKDLKKRRII ENCTETQGHE PSGLDALASA 780 AILGDNVVDS GEQSVGATTR HPRHRPGCTC IVCIQPPSGK GKHKPTCTCN VCLTVRRRFK 840 TLMMRKKKRQ SEREAENAQK DNNNHKDESE INGTSTEVGL HMNHSSENGG CQSRIEADVA 900 ESSTAGQIDL NCEPNPYVQA SGLTLSRLAD AVSQPLNNYM KESCLANMMC EPQAGIGSSL 960 LTQATDESER RLSNEGCLSA VAAWDCEGRG DAD

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MDGVITSQVV FKIWVLQIWT KKGFAGVEFG IMGSKICMNV LCGTTNTHEW KKGWPLRSGG  60
FAHLCFKCGA AYEKLVYCDK FHAGESGWRD CSLCRKPLHC GCIVSKSLYE FLDYGGVGCI  120
SCAKSSQPRV IQNDDVLNGF GGLKISNYSD RQSTAVQNGA FSNTVDEGKL LQLCKIMEAN  180
ESNLLPQPQR GDINVSLVQK KQEEVINHKG EVGLGFSSTT QPSIGSLTFS KSENGRTMIE  240
DMHKSSSQPS LSMTLGSPSA TPSFVQPFPG GLVDGREQSK TPSSFQQGHG REQGTTPSFQ  300
QGLVDGREQS KTSSSFQQGL VDGREHSKTP SSFQQGLVDG REQSKTPSSS FQQGQKSRPI  360
LPKPLKPGVT MSSETNKGGF PNVRVARPPA EGRGKNQLLP RYWPRITDQE LQKLSGDLNS  420
TIVPLFEKVL SASDAGRIGR LVLPKACAEA YFPPISQSEG LPIKIQDVKG NEWMFQFRFW  480
PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPGGRLV MGFRKASKSL DMQDPQTSIL  540
PNGSTPGETS CPSVVENPAT GSGHPGLFQT NTGSKDPHLH ALSEHLHLTD GDMSLHRNDY  600
HGHRTSEDLL QQPVSNSDKK RARNIGPKSK RLLMHSEDVL ELRLTWEEAQ DLLRPPPSVK  660
PSIVTIEDHE FEEYDEPPVF GKRSLFIASS SERQEQWAQC DDCSKWRRLP ADVLLPPKWT  720
CSENSWDTSR RLCSAPEEMS QKDFDSLLRA SKDLKKRRII ENCTETQGHE PSGLDALASA  780
AILGDNVVDS GEQSVGATTR HPRHRPGCTC IVCIQPPSGK GKHKPTCTCN VCLTVRRRFK  840
TLMMRKKKRQ SEREAENAQK DNNNHKDESE INGTSTEVGL HMNHSSENGG CQSRIEADVA  900
ESSTAGQIDL NCEPNPYVQA SGLTLSRLAD AVSQPLNNYM KESCLANMMC EPQAGIGSSL  960
LTQATDESER RLSNEGCLSA VAAWDCEGRG DAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	836	847	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein