PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g254330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 378aa MW: 42821.4 Da PI: 7.2514

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g254330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.1	2.2e-31	84	178	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYn+YA+++GFs+r+s s++s+r+g i++r fvC +eg+r +++ k + + +r+r+etr+gCka+l+vk +++gkw+v+ +++eHnHel Pd.00g254330.m01 84 FYNSYARRTGFSTRVSMSRRSRRDGAIIQRSFVCAREGFRVDKHGKpgsdrEGRVKRPRPETRVGCKAMLVVKIQDSGKWVVSAFVKEHNHEL 176 ****************************************999999988888899********************************** PP FAR1 90 ap 91 +p Pd.00g254330.m01 177 VP 178 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEFEPLSLGN DVIEFDMMGL GDIDHSVDHD DLLHDSPPTG IPTPSVSDVV GSAAIFEPYI 60 PEGDTNLEPY EGMEFESEEA SKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCARE 120 GFRVDKHGKP GSDREGRVKR PRPETRVGCK AMLVVKIQDS GKWVVSAFVK EHNHELVPLE 180 RVHCLRSHRH VSGPAKSLID TLQGAGIGPR GIMSALVKEY GGIKNIGFTE RDCRNYMRSS 240 RQRTLGGDTQ LLLDYLKDKQ AKDPAFFFAV QGDEDQCMSN VFWADPKART DYTYFGDTVT 300 FDTTYRSNRY RLPFAPFTGD EQDKKIQKLE RQLDRAQRKC ELYRASLLSV LKDIEEQKLQ 360 LSVKVENIKL GMKESSIV

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEFEPLSLGN DVIEFDMMGL GDIDHSVDHD DLLHDSPPTG IPTPSVSDVV GSAAIFEPYI  60
PEGDTNLEPY EGMEFESEEA SKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCARE  120
GFRVDKHGKP GSDREGRVKR PRPETRVGCK AMLVVKIQDS GKWVVSAFVK EHNHELVPLE  180
RVHCLRSHRH VSGPAKSLID TLQGAGIGPR GIMSALVKEY GGIKNIGFTE RDCRNYMRSS  240
RQRTLGGDTQ LLLDYLKDKQ AKDPAFFFAV QGDEDQCMSN VFWADPKART DYTYFGDTVT  300
FDTTYRSNRY RLPFAPFTGD EQDKKIQKLE RQLDRAQRKC ELYRASLLSV LKDIEEQKLQ  360
LSVKVENIKL GMKESSIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	143	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-126	FAR1 family protein