PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g257510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 258aa    MW: 29455.5 Da    PI: 8.8658
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g257510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.6e-13132238198
                       EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE CS
                B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkl 84 
                       f+k+l +sdv +  +rl++ k+ +e++       g + +e++++t +d  g+++ + l+++  +  +vlt+GWk F+++ gL    Dfv++ +
  Pd.00g257510.m01 132 FEKQLARSDVKEDqCRLSMNKEDVENNimpllrnGDNLNEGIDVTTYDMAGNEYPMVLKIWAAK-VHVLTGGWKTFCNDLGLVeNQDFVTLWV 223
                       99********9988**********999******966667999****************999987.789**************85789998776 PP

                       -SS.SEE..EEEEE- CS
                B3  85 dgr.sefelvvkvfr 98 
                        ++ +++ l++ +++
  Pd.00g257510.m01 224 FRHvDNGGLCFAIHS 238
                       555566666777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MASREDREDP GYGDGKMTSS TEEGAYLLLH LKHTILNPET ARNLEHMKSK ILSGIKLKSP  60
SRSKRKALRI QEPEAPQARE ATNGAARGRS LPRELQFQQQ ERGSLFYGNY TPPDLPPIPS  120
LQNLIQDCSN PFEKQLARSD VKEDQCRLSM NKEDVENNIM PLLRNGDNLN EGIDVTTYDM  180
AGNEYPMVLK IWAAKVHVLT GGWKTFCNDL GLVENQDFVT LWVFRHVDNG GLCFAIHSRR  240
LPVFEPIKKR RPIRQKYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.16e-30B3 family protein