PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g259550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 222aa    MW: 23781 Da    PI: 4.4374
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g259550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-056082123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C+k+Fs+   L  H++ H
  Pd.00g259550.m01 60 YTCTSCDKVFSTTQALGGHQNAH 82
                      9*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MFNPYRSSAQ SSSTAPNLPI TANTPITPST DSIPIRFPLS PVLGACLSFH TIQSGDSCKY  60
TCTSCDKVFS TTQALGGHQN AHRKERNALF AREQQRAAEE NDRDRDVVLS PDPAGFGFGS  120
SSGGGHGGAS GSGTKRPPEG DGDGADQKKK AKYYEEDDDL KVVMPSMNLS LATRCSCDDL  180
IDEIEGSDSD LEWEDGEYMC FYQGGGASTS KTTEELDLSL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G27880.11e-08C2H2 family protein