PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g260460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 248aa MW: 28720.3 Da PI: 7.0352

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g260460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	6.7e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++ + +G g W+ ++ + g++R++k+c++rw++yl Pd.00g260460.m01 10 KGAWTKEEDGLLIKCMENHGEGKWHEVPYKAGLNRCRKSCRLRWLNYL 57 79********************************************97 PP
2	Myb_DNA-binding	44.7	3.1e-14	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E +l+++++k+lG++ W++Ia +++ gRt + +k++w++ Pd.00g260460.m01 63 RGQFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTSNGVKNYWHT 106 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEGNNLDVKK GAWTKEEDGL LIKCMENHGE GKWHEVPYKA GLNRCRKSCR LRWLNYLKPN 60 IKRGQFTEDE VDLIIRLHKL LGNRWSLIAG RLPGRTSNGV KNYWHTRLRT NSLVKRTTKE 120 KFQETINPIV IRPQPRSFTK SSNFLSFKEP ILDHTQLEKN FSTPSQTSTS TSTRIGSDWW 180 ETFLDDKDDA TERATGSGLG LDEELLASFW VDDDMPQSAR TCINFSEEEL SMSDFAFNLD 240 LWNQSKEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-58	MYB family protein