PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g260480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 146aa    MW: 16780.3 Da    PI: 9.5844
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g260480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.6e-161057148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd ll+++ + +G g W+ ++ + g++R++k+c++rw++yl
  Pd.00g260480.m01 10 KGAWTKEEDGLLIKCMENHGEGKWHEVPYKAGLNRCRKSCRLRWLNYL 57
                      79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MEGNNLDVKK GAWTKEEDGL LIKCMENHGE GKWHEVPYKA GLNRCRKSCR LRWLNYLKPN  60
IKRGQFTEDE VDLIIRLHKL LGNRSVLFGR LLHSSRHFVS FTPLDTSSPV RVHTLPRLSK  120
GKSILYGNSE SEPVSEACAQ LTQEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.14e-39MYB family protein