PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g260500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 379aa MW: 41600.1 Da PI: 6.9681

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g260500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.4e-32	188	241	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Pd.00g260500.m01 188 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 241 9****************************************************7 PP
2	Myb_DNA-binding	46.8	6.8e-15	189	240	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Pd.00g260500.m01 189 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 240 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MPLEGIFIEP SSTTTSPLPD LSLHISPPNT SSSSSSIFNT TSGEPQISTT NSQAHTELSL 60 GRRFTGGAHE EPPQKPYHHH QQQSLPLYRS SNHLSHINNG VSLLDVSSSS GLRPIKGIPV 120 YQHRPFPFLP TENMIPRDHP KDSKMCFYQR PPPSYNLPSL PSASCSSNTP STPYFGGGLD 180 PMSSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR 240 TVKTTDKPAA SSDGSGEDDI LSPIGSATDL HGLRSPNQFP EQRGPSDRSS VQPDLDYTSS 300 TTLWSNSSSS REAFPHTSSH DMDGLTPVSS QLQKISGHQI QECDSTTQLK SYLGSNFETR 360 NPSLEFTLGR PDWNGKPHD

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MPLEGIFIEP SSTTTSPLPD LSLHISPPNT SSSSSSIFNT TSGEPQISTT NSQAHTELSL  60
GRRFTGGAHE EPPQKPYHHH QQQSLPLYRS SNHLSHINNG VSLLDVSSSS GLRPIKGIPV  120
YQHRPFPFLP TENMIPRDHP KDSKMCFYQR PPPSYNLPSL PSASCSSNTP STPYFGGGLD  180
PMSSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR  240
TVKTTDKPAA SSDGSGEDDI LSPIGSATDL HGLRSPNQFP EQRGPSDRSS VQPDLDYTSS  300
TTLWSNSSSS REAFPHTSSH DMDGLTPVSS QLQKISGHQI QECDSTTQLK SYLGSNFETR  360
NPSLEFTLGR PDWNGKPHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-54	G2-like family protein