PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g261620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 229aa    MW: 25762.8 Da    PI: 5.667
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g261620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.1e-18135185255
               AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp     k +r++lg+f+t  +Aaka++ a+ kl+g
  Pd.00g261620.m01 135 HYRGVRRRP-WGKYAAEIRDP---ArKGTRIWLGTFDTDVDAAKAYDCAAFKLRG 185
                       7********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MATPTHEEQD ESTLELIRQH LLGDFTFTDG FFSHLNFQIT DDDFSYDFQP LVVKPECSLS  60
ESESTSPISD PHCHNPQPCN FETKPETIIS PSIKVEPLNM SSPTKGKTTT SDCATPCSAD  120
DKFQQVSGSG EVLRHYRGVR RRPWGKYAAE IRDPARKGTR IWLGTFDTDV DAAKAYDCAA  180
FKLRGRKAIL NFPLEAGQSS QPPVNTARKR RRSVKQEEEE LPETELLKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208212RKRRR
2208213RKRRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-44ERF family protein