PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g262730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family M-type_MADS
Protein Properties Length: 178aa    MW: 19545.3 Da    PI: 9.8294
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g262730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.33e-21244345
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                      ++++s rqvtfskRr+g++KKA+EL +LC+ae+ +i+fs+ gk
  Pd.00g262730.m01  2 VKDSSSRQVTFSKRRTGLFKKANELATLCGAEIGLIVFSPGGK 44
                      5799************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MVKDSSSRQV TFSKRRTGLF KKANELATLC GAEIGLIVFS PGGKPFSFGH PNVESIADRF  60
LNQEGSKSKA GSSNSKNDET VERLSQQLDD LNKKLEAEKK RGHMLDKAIL KAKGLPLKSK  120
APNVRELSQA DLQKMKESLE QLREKVKARA CEMEASSSLL LLANEPDVET DGTVAKNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.14e-37M-type_MADS family protein