PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g262810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 295aa    MW: 33002.3 Da    PI: 6.3115
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g262810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000572452811354
                       HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       R+++++    Lr ++P  +       ++ +++L +Av+Y+ksL
  Pd.00g262810.m01 245 RQKMKKMVRVLRGIVPGgN------EMNTVDVLDEAVQYLKSL 281
                       7889999999999999855......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNIGVTFKRY RAIKEVGKII MSVGVIAYYQ LMQVCQAEYF RQLLKPVTQL SCTRMRDQQF  60
DPNKAAPPFA NQVGNNYMHI PVASAHGAVL PHEAKHIKPF HGVEFQTSDI CPKNFIIFDQ  120
TDHRSQIMFN PAIAHKITGP AFNICAAYIQ DNLGLNEGNN EDRETSSSLK EDSDDIDALL  180
SLEEEELEEY DEEEVSTART HGNYGSMSPD SCSNYGLKTK KNRQCSSLGK SSGIGSSSCN  240
SERKRQKMKK MVRVLRGIVP GGNEMNTVDV LDEAVQYLKS LKVELQNLGV ENLND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.14e-33bHLH family protein