PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g262820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 237aa    MW: 26597.5 Da    PI: 7.6756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g262820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.60.00012162185831
                       HHHHHHHHHHHHHHHHHCTSCCC. CS
               HLH   8 rErrRRdriNsafeeLrellPkas 31 
                         + RR ri ++++ LrellP ++
  Pd.00g262820.m01 162 HAKSRRMRIAERLDALRELLPIST 185
                       5689*****************864 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNFTTIAVQH DVAGLEVRTK EGDWMSAHNM NIDTEATRSI ADMIPGIRYF RVVTAFNFPI  60
SSEIDPFRKL YDKPRNKISS RLDPTVPMAI DEGSPIPSSV NSQTSSQISQ NSQNSILSMS  120
ATIPTSFNIS RIFNTPMDHN NFQVRCLRPV NDELVNAQHQ LHAKSRRMRI AERLDALREL  180
LPISTKVLVI ASMPESDQKE NGEILMLVNG QQELCSISGV LPRHTVVSFI LVKLFGF