PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g265020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 241aa    MW: 25831.6 Da    PI: 8.3876
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g265020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.0001785107123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ykC+ C+k Fs+   L  H  +H
  Pd.00g265020.m01  85 YKCSVCNKAFSSYQALGGHKASH 107
                       9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MALEALKSPS TPSPPFSSFE EVEDRHLNQS QEPWAKRKRS KRPRVDDPPT EEEYLALCLI  60
MLARGTTAEA DSELRPQPPA VKLSYKCSVC NKAFSSYQAL GGHKASHRKS DSSAAAAAVN  120
STDNPSTAAA TTTGRTHECS ICHKTFPTGQ ALGGHKRCHY DGGSGATSAL TTSEGGGAGA  180
SSHSHSQSQS HQSQRGFDLN LPALPEFWPG FGGDKKSQLS VEQEVQSPML GKKPRWLLGR  240
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-44C2H2 family protein