PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g268600.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 399aa MW: 45422.2 Da PI: 8.6232

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g268600.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.2	1.1e-16	92	178	2	96
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +k +++s+v++ ++l+lpk+f+ h + ++tltle esg+++++ + +++ +l++GWk+F+ a++L++gD +v++l++ +f +v Pd.00g268600.m01 92 VKSMIHSNVSSWNCLTLPKQFCHLHL--PLHDTTLTLEVESGEKYRIIF--LAGKR--ILSAGWKKFCTAHKLRVGDLLVLRLVRPLKF--KV 176 6899****************6662..346789***********..55543..69********************9986666..44 PP EE CS B3 95 kv 96 + Pd.00g268600.m01 177 YI 178 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAHEELAVAT QELEVKQREP WKTKKNVLNT RRSPLSSTHM TKRKVPGDPR KHGGCKRKRT 60 MFDNFNEHEN SSASTQVEEI QAILGAEYPI VVKSMIHSNV SSWNCLTLPK QFCHLHLPLH 120 DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFCTAHKLRV GDLLVLRLVR PLKFKVYIMG 180 RHNLAEVDAA FSLLKLNACA KHEVLEENHP KPLSSDVCQG NIRKTSLMLD TKPELIDNQT 240 EEDKEEFGSK FPGGVRYPVP AADFEDVRSI ENFTVLVNDV TIDSWLSKQL RTNYYYLCCS 300 RGSFLHDHLL KSINSKLAAE IITETTNIAN AIRARKLSAS HADYEMWEKT LNAFELLGMD 360 VGFLHARLKR LLSPSFRSEE AVELKRIEDQ VEQICAGGR

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAHEELAVAT QELEVKQREP WKTKKNVLNT RRSPLSSTHM TKRKVPGDPR KHGGCKRKRT  60
MFDNFNEHEN SSASTQVEEI QAILGAEYPI VVKSMIHSNV SSWNCLTLPK QFCHLHLPLH  120
DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFCTAHKLRV GDLLVLRLVR PLKFKVYIMG  180
RHNLAEVDAA FSLLKLNACA KHEVLEENHP KPLSSDVCQG NIRKTSLMLD TKPELIDNQT  240
EEDKEEFGSK FPGGVRYPVP AADFEDVRSI ENFTVLVNDV TIDSWLSKQL RTNYYYLCCS  300
RGSFLHDHLL KSINSKLAAE IITETTNIAN AIRARKLSAS HADYEMWEKT LNAFELLGMD  360
VGFLHARLKR LLSPSFRSEE AVELKRIEDQ VEQICAGGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	59	KRKVPGDPRKHGGCKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	3e-15	B3 family protein