PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g269400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 358aa    MW: 40403.2 Da    PI: 7.7011
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g269400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.81.1e-14611371599
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       r  lpkkf+ +h +k  ++++++lede+g+++e k+     +  + l++GW++F  +++L egD+v+F+++  s+f  +v ++r+
  Pd.00g269400.m01  61 RSGLPKKFCCDHLLK--QDTMIVLEDENGEEFETKY--LAEK--VGLSGGWRGFSMSHKLLEGDIVIFHVVTPSRF--KVYIIRS 137
                       4579********887..7789***************..4444..55***********************8876888..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAVLQNQKHS SSSDPPPPSK SNRGRLPKDK EKLFSKKYSR LTQSQMTKSI VVSANPKVPE  60
RSGLPKKFCC DHLLKQDTMI VLEDENGEEF ETKYLAEKVG LSGGWRGFSM SHKLLEGDIV  120
IFHVVTPSRF KVYIIRSNGL DEADCTVGLT RLDACLKQMD TGHIISCERE ESGNLEPIPE  180
DHAIAFNTKY RPLSDQSEND SEDLGFEVLD GLRLSESVVP FKEMYCMDNF NVLVNGLNIN  240
SEFSKYILNK YYELCCSQNS FLHEHLLEGL NCKLIVGVIS ETINIADAIR ACKITTSEGY  300
FSTWNKTLIA FEGLGMNVRF LRARLDQLAI LASKSKRFKE ARLEELRGKA FGSKRGHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-25B3 family protein