PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g269640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 284aa    MW: 32058 Da    PI: 9.9056
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g269640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.51.5e-181562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+ Ed++l+ +v+++G g+W + +++ g+ R++k+c++rw++yl
  Pd.00g269640.m01 15 KGPWTPAEDQKLLAYVQKYGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 62
                      79*********************************************7 PP
2Myb_DNA-binding46.49.2e-1568111146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++  Ed  +++++++lG++ W++Ia++++ +Rt++++k++w++
  Pd.00g269640.m01  68 RGNFSLLEDRTIIQLHALLGNR-WSAIAAHLP-KRTDNEVKNYWHS 111
                       899*******************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MRKSTHSVAS SGMKKGPWTP AEDQKLLAYV QKYGHGNWQS LPQKAGLQRC GKSCRLRWRN  60
YLRPDIRRGN FSLLEDRTII QLHALLGNRW SAIAAHLPKR TDNEVKNYWH SRLKKLLALK  120
GYDPVTHKPK TTIFGSANGS TDDRKTGSNL NHIAQWESAR LQAEARFVRD SELHKQAQNL  180
YDNNDISTAS SILLGHNKDF GPTDQLFGQN TPQCLDILRA WESILISNYS KATGGQDHIN  240
SFGNGLAGHF EPPIISAISR SNESSLMDRF FHEPVGQCFD ENYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-81MYB family protein