PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g270910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 205aa    MW: 22673.5 Da    PI: 8.2249
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g270910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB161.51.3e-5084179196
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       vreqd+++Pianv+rim+++lP +akis+daket+qecvse+i+f+t+ea+++cqre+rkt++++d+lwa+++lGf++yvepl+++l+k+re 
  Pd.00g270910.m01  84 VREQDQYMPIANVIRIMRRILPPHAKISDDAKETIQECVSEYIAFITGEANERCQREQRKTVTAEDILWAMGKLGFDNYVEPLTLFLQKHRES 176
                       69******************************************************************************************9 PP

             NF-YB  94 ege 96 
                       e+ 
  Pd.00g270910.m01 177 ENS 179
                       875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MERMRGPPSS RHAKSSSGSS KPDLKVFAFD PAFVDVFASQ VNNSERSNSK APINATPAPT  60
NSNAAAAAAN AGDPAQLAPQ QSVVREQDQY MPIANVIRIM RRILPPHAKI SDDAKETIQE  120
CVSEYIAFIT GEANERCQRE QRKTVTAEDI LWAMGKLGFD NYVEPLTLFL QKHRESENSD  180
RSTLRAEFMK RDRAVDFGPA GPRLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21970.11e-59NF-YB family protein