PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g270980.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 187aa    MW: 20436.9 Da    PI: 4.9914
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g270980.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1841.2e-5722117297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       reqdr+lPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+++re+e
  Pd.00g270980.m01  22 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 114
                       89******************************************************************************************* PP

             NF-YB  95 gek 97 
                       gek
  Pd.00g270980.m01 115 GEK 117
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MADSDNDSGG AHTKSNSELS PREQDRLLPI ANVSRIMKKA LPANAKISKD AKETVQECVS  60
EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFEEYV EPLKVYLQRF REMEGEKSSV  120
AARDKDASGG GGNGGVGYES GGAGRWIQTE ISREIPLELV SMAFCSLIGK NDDCVDHKIN  180
EKSSKPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-75NF-YB family protein