PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g280740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 389aa    MW: 44179.6 Da    PI: 10.0782
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g280740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox38.12.7e-12858757
                      --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox  7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                       t++qle+Le+++ ++ryps++++e  A+  +Lt +qV+ WF  +R +ek+
  Pd.00g280740.m01  8 KTQSQLEALESFYSEDRYPSRTAMECHAAAFRLTYKQVRGWFVEKRRREKR 58
                      699**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MMEKIKRKTQ SQLEALESFY SEDRYPSRTA MECHAAAFRL TYKQVRGWFV EKRRREKREN  60
KTTEELGGRN GSGAGAPRVV KHCPSKAPLL LRYKQTQMNG NHIQELLTPD YILKKVFRKD  120
GPPLGVEFDS LPSRALFHST DPEDLHPPCK ENQRETKTRK VTEHAVIGHQ NCNESAPVKK  180
HGVGKGLMTV WRATNPDARD FPVDMGFANG GVTSVSLIPT SVSRKPVTRN RRLQQQKSVP  240
KQGRVRNKVQ EKRKHFVKRR EVESNNENQT LPSKEKCELA LEGASSQEHS DKIAMLVDDE  300
ELELRELQGR PNALGCSDHF TTNGDHACSL CKDLLAKFPP NSVKMKQPFC MQPWDSSPEI  360
VKKLFKVFEL QTVCGLILLS SFANIGHRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12750.11e-57HB-other family protein