PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g284820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 239aa MW: 26484.2 Da PI: 6.4235

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g284820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.6	9.9e-39	7	106	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC+++C++apyf++eq + +f ++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a Pd.00g284820.m01 7 PCGACKFLRRKCVRGCIFAPYFCHEQgATHFSAIHKVFGASNVSKLLAHLPLSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQA 99 7***********************89************************************************************* PP DUF260 93 elallke 99 +la+lk Pd.00g284820.m01 100 QLASLKY 106 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MAGSGSPCGA CKFLRRKCVR GCIFAPYFCH EQGATHFSAI HKVFGASNVS KLLAHLPLSD 60 RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LASLKYQAAQ SFVNGSAVAN 120 PNEKFYGKLP SHTEEAQSWF HEFENSSNSM PQFNSTHINN PGTTSYYENG IMNSNNSVNG 180 SYENSVNIPE ENVSYGSFEE GTSHFMSSFG MQTNYNRQWG FQDADELQSV AFSYIHQHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	7e-60	LBD family protein