PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g286890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 184aa    MW: 20920.9 Da    PI: 6.2252
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g286890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC115.92e-36149816100
             NF-YC  16 fknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100
                        ++helPlar+k+++k+d +vk++s+e+Pvl+skacelfi+eltlrswlh+e ++rrtl+++d a a+ + +   flv  vp d+
  Pd.00g286890.m01  14 NAHHELPLARVKRVMKSDGQVKKVSSETPVLFSKACELFIMELTLRSWLHTERSNRRTLQHCDTARAIMQDELLHFLVHAVPFDH 98 
                       569*******************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MITYFFIMYD TVANAHHELP LARVKRVMKS DGQVKKVSSE TPVLFSKACE LFIMELTLRS  60
WLHTERSNRR TLQHCDTARA IMQDELLHFL VHAVPFDHAH CHKEEEIGKF SQNVDSRSTT  120
GALLLRETNQ LGGGLGEMNQ VLQQYMIDPS MSSAEELCDY FEDSRPSDLK FVATNLGLCL  180
GILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.13e-31NF-YC family protein