PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g289660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 281aa    MW: 32245.1 Da    PI: 7.4641
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g289660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.7e-181764148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ll ++v+++G g+W+ +a++ g++R++k+c++rw +yl
  Pd.00g289660.m01 17 KGPWTPEEDKLLNEYVNLHGEGRWSCVAKCAGLNRSGKSCRLRWVNYL 64
                      79********************************************97 PP
2Myb_DNA-binding506.9e-1670114147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg  T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++
  Pd.00g289660.m01  70 RGHITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNFWRTH 114
                       6778******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MVTMMGWGFA EQEGWRKGPW TPEEDKLLNE YVNLHGEGRW SCVAKCAGLN RSGKSCRLRW  60
VNYLRPGLKR GHITPQEEGI IIELHALWGN KWSTIARYLP GRTDNEIKNF WRTHFKKKEK  120
CTQKQEKRKA QILLAKQQQQ QEQQQQQLQE DQNLKIRATP QSEASQGENI NMTTDHEAQA  180
RQENNMDLIS SSYPNFEGDQ YCLPALMNQG SVGSWADILG EEGLFMGRLW NLDDEHVNGR  240
MDRNTSLSQC NKSAMQNQAA VTAFSSGGDY SNTFYNGGYI F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.16e-71MYB family protein