PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g290450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 212aa    MW: 24682.8 Da    PI: 10.0326
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g290450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.25e-1429107173
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrts 73 
                       +W+++ + +Liea  e++ +l+rg+l++++Weev++++            +r+ +qCk++ + l+k+yk +k+++++  +
  Pd.00g290450.m01  29 CWSEDATFTLIEAWGERHLSLNRGNLRQKHWEEVADAVnashvtaDNPRSRRTDVQCKNRVDTLKKKYKIEKARSEES-E 107
                       7*************************************99999966666789*******************9998874.2 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MDFVAGSPSP VTAPRPPSKT ASVPVREDCW SEDATFTLIE AWGERHLSLN RGNLRQKHWE  60
EVADAVNASH VTADNPRSRR TDVQCKNRVD TLKKKYKIEK ARSEESEGSP SRSSMGGSRM  120
RDRDREVGCV ELAMAIERFA EIYERVEQRK QRQMVELEKQ RMQFAKDLEY HRMQLFMETT  180
KHQLRKIKRA KRSSSSPDNY LEATRFDSHR LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.17e-36Trihelix family protein