PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g292430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 208aa    MW: 23278.8 Da    PI: 6.6458
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g292430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.5e-131612063682
                       EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                B3  36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                       l  +d++g +W++++iyr+ ++r++lt+GW+ F ++++L +gD v+F
  Pd.00g292430.m01 161 LA-KDLHGLEWRFRHIYRGPPRRHLLTTGWSIFISQKNLVSGDAVLF 206
                       44.89****************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEFAAIWTVS CCLRFEKQDG VVLMATTGNL KQIDEALQRP GRMDRVFHLQ SPVTEVEKSA  60
YCNGDCDKVG GGCVYCLSSS MDCDKVGGIV SSSPFSSMEM PTFDLQPQIF CKVVNTNVNS  120
LCILPYRISN IANKENDEVY THVTLLPQPE LVGTNLDGKE LAKDLHGLEW RFRHIYRGPP  180
RRHLLTTGWS IFISQKNLVS GDAVLFLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.14e-29ARF family protein