PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g294510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 202aa    MW: 22125.3 Da    PI: 8.4266
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g294510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.42e-32107163158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep++VNaKQy++Il+RRq+Rak+e+e+k   ksrkpylheSRh+hAlrR+Rg+gGrF
  Pd.00g294510.m01 107 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKSRKPYLHESRHQHALRRARGCGGRF 163
                       69***************************9.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MTSSVHDRSD NSESDDQQSH SSLPAIGISH PGIPTPNIQY AAPPQVGTGH AVAPAAYPYP  60
DPYYRSIFAP YDTQPYPPQP YGGQPTVHLQ LMGIQQAGVP LPSDAVEEPV FVNAKQYHGI  120
LRRRQSRAKA ESENKALKSR KPYLHESRHQ HALRRARGCG GRFLNAKKND NQQDEMSSGD  180
KSQPNINLNS DKSELASSDG TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-58NF-YA family protein